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棉花学报 ›› 2011, Vol. 23 ›› Issue (1): 10-14.

• 研究与进展 • 上一篇    下一篇

雷蒙德氏棉叶绿体基因组Fosmid文库构建

李朋波1, 2,薛龙飞1,王彦霞1,张 曦1,李召虎1,华金平1*   

  1. 1. 中国农业大学农学与生物技术学院/作物遗传改良北京市重点实验室/作物基因组学与遗传改良农业部重点开放实验室/杂种优势研究与利用教育部重点实验室,北京100193;2. 山西省农业科学院棉花研究所,运城 044000
  • 收稿日期:2010-08-31 出版日期:2011-01-15 发布日期:2011-01-15
  • 通讯作者: 通讯作者: 华金平,博士,教授, jinping_hua@cau.edu.cn
  • 作者简介:李朋波(1976-),男,博士,助研,lpbmhs@yahoo.com.cn
  • 基金资助:

    教育部新世纪优秀人才支持计划 (NCET-06-0106);国家863计划项目(2006AA10A108,2007AA10Z125); 教育部长江学者和创新团队发展计划;高等学校学科创新引智计划(111-2-03)

Construction of a Fosmid Library of Chloroplast Genome in Gossypium raimondii

LI Peng-bo1,2, XUE Long-fei1, WANG Yan-xia1, ZHANG Xi1, LI Zhao-hu1, HUA Jin-ping1*   

  1. 1. College of Agronomy & Biotechnology, China Agricultural University/Beijing Key Laboratory of Crop Genetic Improvement/Key Laboratory of Crop Genetic Improvement and Genome of Ministry of Agriculture/ Key Laboratory of Crop Heterosis and Utilization of Ministry of Education, Beijing 100193, China; 2. Cotton Research Institute, Shanxi Academy of Agricultural Sciences, Yuncheng, Shanxi 044000, China
  • Received:2010-08-31 Online:2011-01-15 Published:2011-01-15

摘要: 采用高盐、低pH值法提取雷蒙德氏棉叶绿体DNA;通过物理剪切法获得随机断裂的DNA片段;剪切片段末端、补平修饰后与pCC1FOS载体连接;用噬菌体包装蛋白包装重组DNA,侵染大肠杆菌EPI300,构建了雷蒙德氏棉叶绿体基因组文库。对于叶绿体DNA剪切,以1 mL注射器中等速度吸打18次为最佳参数。叶绿体基因组Fosmid文库滴度为1×104 cfu·mL-1,插入片段大小平均为38 kb,最终筛选出39个克隆用于后续研究,覆盖叶绿体基因组9.2倍。以叶绿体特异标记筛选出能够覆盖雷蒙德氏棉叶绿体全基因组的6个克隆:F66,F46,F28,F8,F55和F3,为基因组结构和功能基因分析提供了良好的基础。

关键词: 雷蒙德氏棉; 叶绿体DNA; Fosmid文库

Abstract: In this paper, a Fosmid library of G. raimondii chloroplast genome was constructed. The chloroplast DNA was isolated by high ionic strength and low pH buffer method. The DNA was randomly sheared and cloned into pCC1FOS vector. Recombinant DNA was packaged with the Lambda Packaging Extracts, then transfected into E. coli strain EPI300. The best sheared parameter employed in the study was 18 times with middle speed using a 1 mL injector. The library of chloroplast genome (titer: 1×104 cfu·mL-1) was obtained in which the average inserted DNA fragment was 38 kb. Thirty-nine clones covering 9.2 fold the chloroplast genome were selected by selection marker to be further analyzed. Six clones, F66, F46, F28, F8, F55, and F3, which could span G. raimondii complete genome, were screened out by cotton chloroplast markers. The library would be a valuable resource for study on genome structure and functional genes investigation in cotton.

Key words: Gossypium raimondii; cpDNA; Fosmid library

中图分类号: 
  • Q812:S562