ÃÞ »¨ ѧ ±¨    Cotton Science    2008£¬20(5)£º399-·âÈý

 

 

The Construction of Cotton Molecular Biology Database System Based on Linux+Apache+MySQL+PHP
ZHANG Rong-zhi, WANG Xing-fen, MA Zhi-ying*, ZHANG Gui-yin, CHI Ji-na
(Key Laboratory of Crop Germplasm Resources of Hebei; Agricultural University of Hebei, Baoding, Hebei 071001, China)

Abstract£ºWith the rapid development of biotechnology and the exponent increase of cotton molecular biology data, in order to further dispose, analyze and use these data, it is necessary to establish the corresponding bioinformatics databases. Based on the research data of our laboratory and of public cotton molecular biology, we constructed a cotton molecular biology database system in the Linux operating system. In the database system, MySQL database was used as a background, and the open environment depended on Apache+PHP. In the Linux operating system, the standalone of wwwBLAST alignment system services was accomplished based on Apache environment. The blast could be operated in the off-line state. The service could make up the blast deficiencies of public databases which were complicated and of weak pertinence. Since the local data were added into databases, the analysis and comparison of data became safer, quicker and more detailed. The database was put out by local area network and could be accessed at author ' s permission. This database, in our laboratory, has been put into application in related gene cloning of fiber development and Verticillium wilt resistance.
Key words£ºcotton; molecular biology database; standalone wwwBLAST; bioinformatics
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