棉 花 学 报     Cotton Science   2008,20(1):3-8

 

SSH Library Construction of Upland Cotton Resistant Cultivar under the Stress of Verticillium dahliae
WANG Xing-fen,TIAN Hai-yan,MA Zhi-ying*,ZHANG Gui-yin*,XUAN Zhao-ling,WANG Wen-sheng,SUN Yan-xiang
(Agricultural University of HebeiKey Laboratory of Crop Germplasm Resources of HebeiBaoding 071001,China )

Abstract:cDNA library of the Upland cotton resistant cultivar,Jimian 20,was constructed using suppression subtractive hybridization (SSH) and pGEM-T Easy vector under the stress of Verticillium dahliae at 8h,12h,24h and 48h post inoculation. This SSH library included eight hundred positive clones. The insert sizes ranged from 0.2kb to 1kb,averaged 400bp,based on restriction endoenzyme digestion and nested PCR. Twenty random clones were selected and sequenced. ESTs similarity analysis via BLASTn and BLASTx showed that all of the twenty ESTs were homologous to the sequences with known functions. Twelve were as known sequences in the BLASTn,accounted for 60% of the total ESTs tested. Fourteen,i.e,70% of the total,were as known sequences in the BLASTx. According to the classification criteria of plant gene function,these homologous sequences were related to ten kinds of disease resistance genes as those reporte,including serine/threonine kinase, glutathione S-transferase,alcohol dehydrogenase,cytochrome P450,ACC oxidase,etc. Querying the GenBank dbEST,as much as 75% of these ESTs were of high homology with the cDNAs that were found under the abiotic or biotic stresses in plants. These stress involved pathogen,low temperature,ultraviolet,heat shocking,salt stress,oxygen stress,and salicylic acid etc.
Key words:cotton;Verticillium wilt;SSH library;disease resistance gene     [Full Text,2953KB]